.. _Examples:

Examples
========================================

.. important::

    **All examples require** that the file :download:`common.py
    <examples/common.py>` be placed in the working directory.

    The original Jupyter notebooks, ``common.py``, and the trajectory files
    can be found in the ``docs/examples`` directory in the source tree.

.. toctree::
    :maxdepth: 2

    examples/01a_Getting_Started_RuH
    examples/02a_Number_Density_Along_Axis
    examples/03a_HydrogenBonds_Radial_Angular_Distribution_Functions
    examples/04a_Lifetime_TimeCorrelationFunction_SSSP_Intermittent
    examples/05a_MSD_ProtonTransferFreeEnergyLandscape
    examples/06a_Block_Averages